Isolation By Distance

Web Service

Genetic distances/similarities

Version 3.23

Written by Andrew J. Bohonak and implemented by Yoko Suzuki, Julia Turner, Eric Ngan and Jensen with the aid of Scott Kelley


Estimated Samples of Request Processing Times
1. INPUT DATA Maximum Data Limits
Sample Data

Input Data Filename:

OR Paste Data:

2. BASIC SETTINGS
Number of randomizations (50-30,000):
For IBD plots, would you like a background grid?
Also perform analysis on Logarithmic (Genetic Distance)?
Also perform analysis on Logarithmic (Geographic Distance)?
Use negative genetic distances? (Otherwise, they will be set to zero.)
When log-transforming (genetic distance), negative genetic distances will be:


When log-transforming (genetic distance), set genetic distances of zero to:
Calculate RMA regression residuals?
3. RAW DATA SETTINGS
Analyze IBD with:



If F <=0, genetic similarity (M) is infinity. What value should be used for M[max]? (Should be slightly larger than the second highest M; you may need to return to this screen and change M[max] after examining the scatterplots.)
If calculating Rousset's distance, set genetic distances of 1.00 to:
Calculate summary stats for each locus?
3. SUBMIT


Note: if you return to this page using your browser's "back" button, please refresh the page. Otherwise, settings may inadvertently revert to their original state without your knowledge.